YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45825123
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTAFLEAS FLLICWSQAV SSHVFGYSEP NQRRWARHHG HCAGKTQSPI AITTSRTTAI  60
   61 HMPAVDMIGY HNLLPYPLKM INNGHTVSIT IPKVNVTEVG EDFLPYIRGA KLPGEFEVEG 120
  121 LHFHWGDKNN RGSEHVINDI RYTMEMHIVH RNKKYATIGE ALNHPDGAAV LGFFFNLDED 180
  181 EGAGLVTINR HLHLIADPNQ EATLNVTFSL SSLIAGVDVD KFYTYKGSLT TPPCSEAVTW 240
  241 ILFPDPIPIS PKQISRFRQL SDTQDGALVD NFRTLQPVGN RRIFARTGHV RHTSIATLKH 300
  301 EGEYLKYDWF Y

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	311	0.99