YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38604456
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALHATAFSF TGVSTSSKSS RSALLSLPRR CAVKATSQYP HSFPRCKIQG RALPSDNGLV  60
   61 EKDESSLVVC FGEMLIDFVP TTSGLSLAEA PAFKKAPGGA PANVAVGISR LGGSSAFIGK 120
  121 VGEDEFGYML AEILKENNVN SDGMRFDPGA RTALAFVTLR KDGEREFMFY RNPSADMLLQ 180
  181 EDELDLELIR KAKVFHYGSI SLITEPCKSA HIAAAKAAKD AGVILSYDPN LRLPLWPSAE 240
  241 SAREGILSIW NTADIIKISE EEISFLTQGE DPYDDNVVRK LYHPNLKLLL VTEGPEGCRY 300
  301 YTKDFSGRVK GIKVDAVDTT GAGDAFVAGI LSQLASDVSL LQDEGKLRDA LSFANACGAL 360
  361 TVMERGAIPA LPTKEVVLNT LLKSVA

Type	Start	End	Confidence
Signal Peptide	1	22	0.86
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	386	0.99