YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82051, gi\|259453
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERGTYAHQ VQVHPQQTAN QPGGVKSLLP KNSPSTSQVL AVVTLLPVGG TLLFLAGITL  60
   61 VGTLIGLAVA TPLFLLFSPV LVPAALTIGL AVTGFLGSGA FGLTGLSSLS WVLSYFRQAS 120
  121 QRVPDQIELA KKRAQEMAAY AGQKTKEVGD TIQSKAAQAQ DTTATTGRDT RSTARDTSRT 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	40	0.81
Transmembrane Helix	41	75	0.73
Non-Cytoplasmic	76	83	0.53
Transmembrane Helix	84	113	0.78
Cytoplasmic	114	180	0.79