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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11385307
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPGTQSPFF LLLLLTVLTA TTAPKPATVV TGSGHASSTP GGEKETSATQ RSSVPSSTEK  60
   61 NAVSMTSSVL SSHSPGSGSS TTQGQDVTLA PATEPASGSA ATWGQDVTSV PVTRPALGST 120
  121 TPPAHDVTSA PDNKPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 180
  181 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 240
  241 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 300
  301 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 360
  361 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 420
  421 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 480
  481 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 540
  541 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 600
  601 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 660
  661 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 720
  721 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 780
  781 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 840
  841 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 900
  901 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST 960
  961 APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST APPAHGVTSA PDTRPAPGST1020
 1021 APPAHGVTSA PDNRPALGST APPVHNVTSA SGSASGSAST LVHNGTSARA TTTPASKSTP1080
 1081 FSIPSHHSDT PTTLASHSTK TDASSTHHST VPPLTSSNHS TSPQLSTGVS FFFLSFHISN1140
 1141 LQFNSSLEDP STDYYQELQR DISEMFLQIY KQGGFLGLSN IKFRPGSVVV QLTLAFREGT1200
 1201 INVHDVETQF NQYKTEAASR YNLTISDVSV SDVPFPFSAQ SGAGVPGWGI ALLVLVCVLV1260
 1261 ALAIVYLIAL AVCQCRRKNY GQLDIFPARD TYHPMSEYPT YHTHGRYVPP SSTDRSPYEK1320
 1321 VSAGNGGSSL SYTNPAVAAT SANL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle