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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4185813
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPLFKGLKQ MAKPIAYVSR FSAKRPIHII LFSLIISAFA YLSVIQYYFN GWQLDSNSVF  60
   61 ETAPNKDSNT LFQECSHYYR DSSLDGWVSI TAHEASELPA PHHYYLLNLN FNSPNETDSI 120
  121 PELANTVFEK DNTKYILQED LSVSKEISST DGTKWRLRSD RKSLFDVKTL AYSLYDVFSE 180
  181 NVTQADPFDV LIMVTAYLMM FYTIFGLFND MRKTGSNFWL SASTVVNSAS SLFLALYVTQ 240
  241 CILGKEVSAL TLFEGLPFIV VVVGFKHKIK IAQYALEKFE RVGLSKRITT DEIVFESVSE 300
  301 EGGRLIQDHL LCIFAFIGCS MYAHQLKTLT NFCILSAFIL IFELILTPTF YSAILALRLE 360
  361 MNVIHRSTII KQTLEEDGVV PSTARIISKA EKKSVSSFLN LSVVVIIMKL SVILLFVFIN 420
  421 FYNFGANWVN DAFNSLYFDK ERVSLPDFIT SNASENFKEQ AIVSVTPLLY YKPIKSYQRI 480
  481 EDMVLLLLRN VSVAIRDRFV SKLVLSALVC SAVINVYLLN AARLEDPRGM TNETSDRPLV 540
  541 HFTPNKGWMN DPNGLWYDEK DAKWHLYFQY NPNDTVWGTP LFWGHATSDD LTNWEDQPIA 600
  601 IAPKRNDSGA FSGSMVVDYN NTSGFFNDTI DPRQRCVAIW TYNTPESEEQ YISYSLDGGY 660
  661 TFTEYQKNPV LAANSTQFRD PKVFWYEPSQ KWIMTAAKSQ DYKIEIYSSD DLKSWKLESA 720
  721 FANEGFLGYQ YECPGLIEVP TEQDPSKSYW VMFISINPGA PAGGSFNQYF VGSFNGTHFE 780
  781 AFDNQSRVVD FGKDYYALQT FFNTDPTYGS ALGIAWASNW EYSAFVPTNP WRSSMSLVRK 840
  841 FSLNTEYQAN PETELIPSSL SNEEILQFSK EEEVPLVALS LPSGKFSDDE IIAFLNNGVS 900
  901 SLFIASQDAK TAEHLVEQLN VPKERVVVEE NGVFSNQFMV KQKFSQDKIV SIKKLSKDML 960
  961 TKEVLGEVRT DRPDGLYTTL VVDQYERCLG LVYSSKKSIA KAIDLGRGVY YSRSRNEIWI1020
 1021 KGETSGNGQK LLQISTDCDS DALKFIVEQE NVGFCHLETM SCFGEFKHGL VGLESLLKQR1080
 1081 LQDAPEESYT RRLFNDSALL DAKIKEEAEE LTEAKGKKEL SWEAADLFYF ALAKLVANDV1140
 1141 SLKDVENNLN MKHLKVTRRK GDAKPKFVGQ PKAEEEKLTG PIHLDVVKAS DKVGVQKALR1200
 1201 RPIQKTSEIM HLVNPIIENV RDKGNSALLE YTEKFDGVKL SNPVLNAPFP EEYFEGLTEE1260
 1261 MKEALDLSIE NVRKFHAAQL PTETLEVETQ PGVLCSRFPR PIEKVGLYIP GGTAILPSTA1320
 1321 LMLGVPAQVA QCKEIVFASP PRKSDGKVSP EVVYVAEKVG ASKIVLAGGA QAVAAMAYGT1380
 1381 ETIPKVDKIL GPGNQFVTAA KMYVQNDTQA LCSIDMPAGP SEVLVIADED ADVDFVASDL1440
 1441 LSQAEHGIDS QVILVGVNLS EKKIQEIQDA VHNQALQLPR VDIVRKCIAH STIVLCDGYE1500
 1501 EALEMSNQYA PEHLILQIAN ANDYVKLVDN AGSVFVGAYT PESCGDYSSG TNHTLPTYGY1560
 1561 ARQYSGANTA TFQKFITAQN ITPEGLENIG RAVMCVAKKE GLDGHRNAVK IRMSKLGLIP1620
 1621 KDFQ

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