YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4104238
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRFWQILIA LLLVPTLAQA EEATVEKIHD APTVRGSIIA AMLQDHDNPF LLYPYETNYL  60
   61 LYTYTSDINK DAISSYDWAQ NAKKDEVKFQ LSLGFPIWRG IAGDNSLLGA SYTQRSWWQA 120
  121 SNSDESSPFR ETNYEPQIFL AWATDYELAG WTFREVEFGY NHQSNGKADP TSRSWDRVYT 180
  181 RLMAQRGNLE IDLKPWYRIP ESDSKDDNPD INKYMGYYRL KVGYALGESV FSIDGRYNWN 240
  241 TGYGGAEMGW SYPITKHVRF YTQVFSGYGE SMIDYNFRQT RVGVGIMLND VL

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	292	0.99