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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4115920
Protein type: Globular with Signal Peptide
Type Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNYRTSIYV VLSLVIFLNV QRSFVAESSA KRKVHIVYLG EKQHDDPEFV TESHHRMLWS  60
   61 LLGSKEDAND SMVYSYRHGF SGFAAKLTES QAKKIADLPD VVHVIPDSFY KLATTRTWDY 120
  121 LGLSAANPKS LLHETNMGEQ IIIGVIDTGV WPESEVFNDS GFGPVPSHWK GGCETGENFN 180
  181 SSNCNKKLIG AKYFINGFLA ENESFNSTNS LDFISPRDLD GHGTHVSTIA GGSFVPNISY 240
  241 KGLAGGTVRG GAPRAHIAMY KACWYLDDDD TTTCSSADIL KAMDEAMHDG VDVLSISLGS 300
  301 SVPLYGETDI RDGITTGAFH AVLKGITVVC SGGNSGPDSL TVTNTAPWII TVAATTLDRS 360
  361 FATPLTLGNN KVILVTTRYT LFINCSTQVK QCTQVQDLAS LAWFILRIQG IATKVFLGGL 420
  421 GVIIARHPGY AIQPCLDDFP CVAVDWELGT DILLYTRSSG SPVVKIQPSK TLVGQPVGTK 480
  481 VATFSSRGPN SIAPAILKPD IAAPGVSILA ATTNTTFSDQ GFIMLSGTSM AAPAISGVAA 540
  541 LLKALHRDWS PAAIRSAIVT TAWKTDPFGE QIFAEGSPPK LADPFDYGGG LVNPEKSANP 600
  601 GLVYDMGLED YVLYMCSVGY NETSISQLIG KTTVCSNPKP SVLDFNLPSI TIPNLKDEVT 660
  661 ITRTVTNVGP LNSVYRVTVE PPLGFQVTVT PETLVFNSTT KKVYFKVKVS TTHKTNTGYY 720
  721 FGSLTWSDSL HNVTIPLSVR TQILQNYYDE N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle