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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3893824
Protein type: Globular with Signal Peptide
Type Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRRFLSSM LRSSIRHSSS KPSLTTHIHR PSPAGHLLHR AVNYATSAAA KATPAPQKKT  60
   61 PPPKIKETGG KITDEYTGAG AIGSVCQVIG AVVDVRFDEG LPPILTALEV MDNDIRLVLE 120
  121 VAQHLGENMV RTIAMDGTEG LVRGQRVLNT GSPITVPVGR ATLGRIINVI GEAIDERGDI 180
  181 KTDHYLPIHR EAPSFVEQAT EQQILVTGIK VVDLLAPYQK GGKIGLFGGA GVGKTVLIME 240
  241 LINNVAKAHG GFSVFAGVGE RTPEGNDLYR QMIESGVINL GDNQGESKCA LVYGQMNEPP 300
  301 GARARVGLTG LTVAEHFRDA EGQDVLLFID NIFRFTQANS EVSALLGRIP SAVGYQPTLP 360
  361 THLGGLQQRI TTTKKGSITS VQAIYVPADD LTDPAPATTF AHLDATTVLS RQISELGIYP 420
  421 AVDPLDSTSR MLSPHILGED HYNTARGVQK VLQNYKNLQD IIAILGMDEL SEDDKLTVAR 480
  481 ARKIQRFLSQ PFHVAEVFTG APGKYVDLKE SIQSFQGVLD GKYDDLSEQS FYMVGGIEEV 540
  541 IAKAEKIAKE SAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle