YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4104432
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASAASSEH FEKLHEIFRG LLEDLQGVPE RLLGTAGTEE KKKLVRDFDE KQQEANETLA  60
   61 EMEEELRYAP LTFRNPMMSK LRNYRKTLLN STVSRSTPLT AAPGGRGDLK YGTYTLENEH 120
  121 LNRLQSQRAL LLQGTESLNR ATQSIERSHR IATETDQIGT EIIEELGEQR DQLERTKSRL 180
  181 VNTNENLSKS RKILRSMSRK VITNKLLLSV IILLELAILV GLVYYKFFRH H

Type	Start	End	Confidence
Cytoplasmic	1	200	0.90
Transmembrane Helix	201	225	0.87
Non-Cytoplasmic	226	231	0.80