YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CP1_APLCA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLAKISVVV LLLAIDGTSS SESTDNVVLS SSPDSQKAAT SRHKRAPGWG KRSSLNDEDL  60
   61 FADSDSAQEL LDSVAALKRA PGWGKRFSGL MSEGSSLEAK RAPGWGKRGQ EIDVDEDGSE 120
  121 QEKRAPGWGK RAPGWGKRAP GWGKRAPGWG KRAPGWGKRA PGWGKRSGGD YCETLEKMVD 180
  181 AYIYKAVEVD SRRLADCGSG EGTNEPFRK

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	209	0.99