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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|4008010
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCLLILLLT LICFSLRLCL ATDVITFSSE FRDSETVVSN HSTFRFGFFS PVNSTGRYAG  60
   61 IWFNNIPVQT VVWVANSNSP INDSSGMVSI SKEGNLVVMD GRGQVHWSTN VLVPVAANTF 120
  121 YARLLNTGNL VLLGTTNTGD EILWESFEHP QNIYLPTMSL ATDTKTGRSL KLRSWKSPFD 180
  181 PSPGRYSAGL IPLPFPELVV WKDDLLMWRS GPWNGQYFIG LPNMDYRINL FELTLSSDNR 240
  241 GSVSMSYAGN TLLYHFLLDS EGSVFQRDWN VAIQEWKTWL KVPSTKCDTY ATCGQFASCR 300
  301 FNPGSTPPCM CIKRFKPQSY AEWNNGNWTQ GCVRKAPLQC ESRDNNDGSR KSDGFVRVQK 360
  361 MKVPHNPQRS GANEQDCPES CLKNCSCTAN SFDRGIGCLL WSGNLMDMQE FSGTGVVFYI 420
  421 RLADSEFKKR TNRSIVITVT LLVGAFLFAG TVVLALWKIA KHREKNRNTR LLNERMEALS 480
  481 SNDVGAILVN QYKLKELPLF EFQVLAVATN NFSITNKLGQ GGFGAVYKGR LQEGLDIAVK 540
  541 RLSRTSGQGV EEFVNEVFVI SKLQHRNLVR LLGFCIEGEE RMLVYEFMPE NCLDAYLFDP 600
  601 VKQRLLDWKT RFNIIDGICR GLMYLHRDSR LKIIHRDLKA SNILLDENLN PKISDFGLAR 660
  661 IFQGNEDEVS TVRVVGTYGY MAPEYAMGGL FSEKSDVFSL GVILLEIVSG RRNSSFYNDG 720
  721 QNPNLSAYAW KLWNTGEDIA LVDPVIFEEC FENEIRRCVH VGLLCVQDHA NDRPSVATVI 780
  781 WMLSSENSNL PEPKQPAFIP RRGTSEVESS GQSDPRASIN NVSLTKITGR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle