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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1076436, gi|1...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGVRYIYHH FYTSLLVFVV MILFRSALSI YINTLSSTES LTISNNRTLV SPGDVFELGF  60
   61 FTPGSSSRWY LGIWYKKLPY ITYVWVANRD NPLSNSTGTL KISGNNLFLL GDSNKSIWST 120
  121 NLTRGNERSP VVAELLANGN FVMRDSNNND ASGFLWQSFD YPTDTLLPEM KLGYDLKTGL 180
  181 NRFLTSSRNF DDPSSGDYSY KLEPRRLPEF YLLLGDVREH RSGPWNGIQF SGIPEDQKLS 240
  241 YMVYNFTKNS EEVAYTFRMT NNSFYSRLTI NSEGYLERLT WAPSSVVWNV FWSSPNHQCD 300
  301 MYRMCGPYSY CDVNTSPSCN CIQGFNPGNV QQWALRNQIS GCKRRTRLSC NGDGFTRMKN 360
  361 IKLPDTRMAI VDRSIGLKEC EKRCLSDCNC TAFANADIRN RVTGCVIWTG ELEDMRNYAE 420
  421 GGQDLYVRLA AADLVKKRNG NWKIISLIVG VSVVLLLLLL LLIMFCLWKR KQNRAKAMAT 480
  481 SIVNQQRNQN VLMNTMTQSN KRQLSRENKA DEFELPLIEL EAVVKATENF SNCNELGRGG 540
  541 FGIVYKGMLD GQEVAVKRLS KTSLQGIDEF MNEVRLIARL QHINLVRILG CCIEAGEKIL 600
  601 IYEYLENSSL DYFLFGKKRS SNLNWKDRFA ITNGVARGLL YLHQDSRFRI IHRDLKPGNI 660
  661 LLDKYMIPKI SDFGMARIFA RDETQVRTDN AVGTYGYMSP EYAMYGVISE KTDVFSFGVI 720
  721 VLEIVIGKRN RGFYQVNPEN NLPSYAWTHW AEGRALEIVD PVILDSLSSL PSTFKPKEVL 780
  781 KCIQIGLLCI QERAEHRPTM SSVVWMLGSE ATEIPQPKPP VYCLIASYYA NNPSSSRQFD 840
  841 DDEPWTVNKY TCSVIDAR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle