YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13492588
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCALVRRRS SGTRRCASPL FSCLSRILST RSPLCAPNGD PLHICSVTHP HCSASFSFTC  60
   61 LSNLSAHRPA LQCKAPLRCK LHFSMHKRLR RADNAAPQPV KTPKLANREH PLSSPVEHGD 120
  121 GTSRSPYRLP LRKTPNASGC LHCPTHTCHC VWFGAQLEHC YASLSLKRET ERIKKRELCA 180
  181 KSILPPFVTR LIRIANVAPG ETFYDLGCGN GSVLFQVAAL TGARCVGVEI NPHNAEVANA 240
  241 AWAFLRPIFE AQFKRELSVE IVCADFCTLL RDAVYFPTPC VIWAANLLLP RPVNHYLSER 300
  301 LRSVPRGTRI MCFEDMYPHS RSLARLRDPD AFEKFDMLDY EWQPDSVEWC SNTGRFFLYV 360
  361 KRT

Type	Start	End	Confidence
Signal Peptide	1	29	0.92
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	363	0.99