YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14031065
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.30
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WIGIIVTTST NDWVVTCSYT IPTCRKMDEL GSKGLWADCV MATGLYHCKP LVDILILPGY  60
   61 VQACRALMIA ASVLGLPAIL LLLTVLPCIR MGHEPGVAKY RRAQLAGVLL I

Type	Start	End	Confidence
Cytoplasmic	1	34	0.68
Transmembrane Helix	35	49	0.30
Non-Cytoplasmic	50	65	0.46
Transmembrane Helix	66	89	0.85
Cytoplasmic	90	111	0.58