YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14031051
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLKLVYTL TIMMSFLSSA LSSWGGGLFP EFYQFSCPQA NEIVMSVLEE AIAKDPRMAA  60
   61 SLLRLHFHDC FVQGCDASIL LDKTSAFKSE KDAGPNKNSI RGFEVIDQIK ARLEQVCPHT 120
  121 VSCADILALA ARDSTVLSGG PHWEVPLGRR DSKIANLKKA NTNIPAPNST IQNLITLFAR 180
  181 QGLSEQDLVA LSGAHTIGMA RCVSFRQRLY NQNGDNLPDA TLEKTYYTGL KTACPRIGGD 240
  241 NNISPLDFTS PVRFDNTYFQ LLLWGKGLLN SDEVLLTGKV KKTKELVKSY AENEALFFHH 300
  301 FAKSMVKMGN ITPLTGFKGD IRKNCRRLN

Type	Start	End	Confidence
Signal Peptide	1	22	0.90
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	329	0.99