YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HEMH_POLSJ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFAPEPSFS HGKPPAASCA TAILLCNLGT PDAPTAPALR RYLAEFLSDP RVVEIPRPIW  60
   61 WLILHGIILR LRPKKSATKY ASIWTPEGSP LKVWTQKQAL MLRGYLGARG HTVEVRYAMR 120
  121 YGNPSIASQL NQLKADGATR ILILPAYPQY SGTTTASVFD AVYSWAARVR RIPEFRFVNN 180
  181 YHDDPGYISA LAERVRTHWR HYGQAGQLVM SFHGVPERTL KLGDPYHCEC HKTARLLAEK 240
  241 LGLGKDRYKV TFQSRFGKAK WLEPYTEPTL IRMAQAGIER VDVVCPGFTG DCLETLEEIA 300
  301 MEARHAFLKA GGKEFHYIEC LNDSPTWIAA LAEFSARQLA GWPTQAPRDT EALRKSGERA 360
  361 LAMGAPR

Type	Start	End	Confidence
Signal Peptide	1	35	0.75
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	367	0.99