YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91789858, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSPLTTSH SPLARKGIIL AGGSGTRLHP ATLAISKQLL PVYDKPMIYY PLSTLMLAGM  60
   61 RDILVISTPQ DTPRFQQLLG DGSQWGLNLQ YAVQPSPDGL AQAFIIGEPF IGNSPSALVL 120
  121 GDNIFYGHDF HQLLGSAMAR TEGASVFAYH VHNPERYGVA EFDARGKVLS LEEKPKQPKS 180
  181 NYAVTGLYFY DNQVVDLAKS LKPSLRGELE ITDLNRLYLE RGQLDVEIMG RGYAWLDTGT 240
  241 HESLLEAGQF IATLENRQGL KVACPEEIAY RQHWIDASQL EKLAQPLAKN GYGQYLLRIL 300
  301 KEKVF

Type	Start	End	Confidence
Signal Peptide	1	30	0.47
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	305	0.97