YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53798443
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNAQSHNWL STILIIVGVA WIVISRPPDM NPTVPVPQPG FVAPAIVLPQ LDGQTLSLSE  60
   61 LQGQVVIVNF WASWCGPCRA EMPMLEQLYQ AERRRGLTVL AVNSTVQDNP ADVSNMQRDF 120
  121 GLSFPIVLDY DGSVGNRYGV RMLPTTFIID RKGVVRRVLF GGPLSEANLR NVIEPLLAET 180
  181 E

Type	Start	End	Confidence
Cytoplasmic	1	6	0.73
Transmembrane Helix	7	25	0.87
Non-Cytoplasmic	26	181	0.69