YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|53795841
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSHYQVVI AGGGTGGLTV AAQLMDQPNP PEVALIEPST VHYYQPLWTL VGGGVFPREQ  60
   61 SARPEADYIP PGVTWIKEAV KAFDPDANSL TLSNGETITY DYLVVALGIQ IDWGKIKGLP 120
  121 ETLGKNGVCS NYSYDTVEYT WQNIRTFRGG NAVFTHPSTP IKCGGAPQKI VYLADDYFRR 180
  181 SGARQQSKLN FYHAGTAIFA VKKYADALNR VVARKGIDVH YQHDLIEVRG EAREAVFMNL 240
  241 ATKETVTVHF DMLHVTPPMS APDVIKSSKL AHTTGWVEVD KHTLQHVRYP NVFSLGDCSN 300
  301 LPTSKTGAAI RKQAPVLVAN LMAAMANETL PATYDGYTSC PLVTGYGSLI LAEFDYTNQP 360
  361 KESFPFDQSQ ERYSMYALKA YGLPAMYWNG MLRGRM

Type	Start	End	Confidence
Signal Peptide	1	22	0.65
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	396	0.98