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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7493833
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITEGFPPNL NLAKGSSMLE KRVDSLRQLN TTTVNQLLGL PGMTSTFTAP QLLQLRIIAI  60
   61 TASAVSLIAG CLGMFFLSKM DKRRKVFRHD LIAFLIICDF LKAFILMIYP MIILINNSVY 120
  121 ATPAFFNTLG WFTAFAIEGA DMAIMIFAIH FAILIFKPNW KWRNKRSGNM EGGLYKKRSY 180
  181 IWPITALVPA ILASLAFINY NKLNDDSDTT IILDNNNYNF PDSPRQGGYK PWSAWCYLPP 240
  241 KPYWYKIVLS WGPRYFIIIF IFAVYLSIYI FITSESKRIK AQIGDFNHNV LEEEEKEKKK 300
  301 LFGLGHWGKA KWYFRSYFKL PLLHLLRNLK NFFTISFIDP NEETDDSGSS NGTFNFGESS 360
  361 NEIPTLFRKT NTGSDENVSA SGGVRLLDYN SAKPLDMSKY AMSEQPDLER NNPFDCENDI 420
  421 TLNPSELVSK QKEHKVTFSV ENEGLDTRKS SMLGHQTFSC QNSLESPLAM YDNKNDNSDI 480
  481 TSNIKEKGGI INNNSNNDDD DNNNNNDNDN DNNNSNNNNN NNNNNNNNNN NNNNNNNNNN 540
  541 NNNNNSNNIK NNVDNNNTNP ADNIPTLSNE AFTPSQQFSQ ERVNNNADRC ENSSFTNVQQ 600
  601 HFQAQTYKQM KKRRAQIQKN LRAIFIYPLS YIGIWLFPII ADALQYNHEI KHGPTMWVTY 660
  661 IDTCVRPLSC LVDVIVYLFK EKPWNYSWAK TESKYLIEKY ILKGELGEKE ILKFCHSNWG 720
  721 KRGWYYRGKW KKRKCWKYST NPLKRIWLFV ERFFKQLFEL KLHFSFYDNC DDFEYWENYY 780
  781 SAKDSNDNKR TESDETKTNS SDRSLPSNSL ELQAMLNNIT AEEVEVPLFW RIIHHIPMLG 840
  841 GIDLDELNRL LKIRYNNDHF SLPGLKFALN QNKSHDKHQD VSTNSMVKSS FFSSNIVTND 900
  901 DENSIEEDKN LRYSDASASE NYLVKPTIPG TTPDPIIEAQ NDNDSSDSSG IDLIAFLRNG 960
  961 PL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle