YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124266931, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPVDTHHH DGHEGDEAGH GSLKGYVIGF MLSLVLTAIP FWLVMGKVIA SSGLTALVIL  60
   61 GFAAVQIVVH MVYFLHMNAK SEGGWTILAL IFTLVLVVIT LSGSLWVMYH LNHNMMPASM 120
  121 HEVRNMP

Type	Start	End	Confidence
Cytoplasmic	1	24	0.55
Transmembrane Helix	25	45	0.92
Non-Cytoplasmic	46	52	0.45
Transmembrane Helix	53	75	0.91
Cytoplasmic	76	84	0.51
Transmembrane Helix	85	109	0.91
Non-Cytoplasmic	110	127	0.56