YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73667130, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNDENKCSV FKTKVKRRDF LGLTTLSMAG IGLFSSVYPL IKFLSPSAEV VAQSTIEVNL  60
   61 SDIKEGKTKV VKWQGKPVFI RKRTTQEIEE ARSVKMDSLK DPQSDQERTH VGREEWLVMV 120
  121 GICTHLGCVP VEVDDGKKGW YCPCHGSKYD TSGRIVSGPA PLNLPVPDYY FSRKDVIVIG 180
  181 TKGTDVA

Type	Start	End	Confidence
Cytoplasmic	1	19	0.95
Transmembrane Helix	20	41	0.90
Non-Cytoplasmic	42	187	0.99