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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7466262
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRYVQKDIQ GTTEPQFRNS HSRTSGTVTL YLPVSTFVGT GFFIHPQSKE KLMKRHLNTC  60
   61 YRLVWNHMTG AFVVASELAR ARGKRGGVAV ALSLAAVTSL PVLAADIVVH PGETVNGGTL 120
  121 ANHDNQIVFG TTNGMTISTG LEYGPDNEAN TGGQWVQDGG TANKTTVTSG GLQRVNPGGS 180
  181 VSDTVISAGG GQSLQGRAVN TTLNGGEQWM HEGAIATGTV INDKGWQVVK PGTVATDTVV 240
  241 NTGAEGGPDA ENGDTGQFVR GDAVRTTINK NGRQIVRAEG TANTTVVYAG GDQTVHGHAL 300
  301 DTTLNGGYQY VHNGGTASDT VVNSDGWQIV KNGGVAGNTT VNQKGRLQVD AGGTATNVTL 360
  361 KQGGALVTST AATVTGINRL GAFSVVEGKA DNVVLENGGR LDVLTGHTAT NTRVDDGGTL 420
  421 DVRNGGTATT VSMGNGGVLL ADSGAAVSGT RSDGKAFSIG GGQADALMLE KGSSFTLNAG 480
  481 DTATDTTVNG GLFTARGGTL AGTTTLNNGA ILTLSGKTVN NDTLTIREGD ALLQGGSLTG 540
  541 NGSVEKSGSG TLTVSNTTLT QKAVNLNEGT LTLNDSTVTT DVIAQRGTAL KLTGSTVLNG 600
  601 AIDPTNVTLA SGATWNIPDN ATVQSVVDDL SHAGQIHFTS TRTGKFVPAT LKVKNLNGQN 660
  661 GTISLRVRPD MAQNNADRLV IDGGRATGKT ILNLVNAGNS ASGLATSGKG IQVVEAINGA 720
  721 TTEEGAFVQG NRLQAGAFNY SLNRDSDESW YLRSENAYRA EVPLYASMLT QAMDYDRIVA 780
  781 GSRSHQTGVN GENNSVRLSI QGGHLGHDNN GGIARGATPE SSGSYGFVRL EGDLMRTEVA 840
  841 GMSVTAGVYG AAGHSSVDVK DDDGSRAGTV RDDAGCLGGY LNLVHTSSGL WADIVAQGTR 900
  901 HSMKASSDNN DFRARGWGWL GSLETGLPFS ITDNLMLEPQ LQYTWQGLSL DDGKDNAGYV 960
  961 KFGHGSAQHV RAGFRLGSHN DMTFGEGTSS RAPLRDSAKH SVSELPVNWW VQPSVIRTFS1020
 1021 SRGDMRVGTS TAGSGMTFSP SQNGTSLDLQ AGLEARVREN ITLGVQAGYA HSVSGSSAEG1080
 1081 YNGQATLNVT F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle