YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77967227, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLINCAAYQD GRKLADIDID AISDYVSKPE CFVWVALKDP TPAELDLMGE EFGLHELALE  60
   61 DARKGHQRPK IEEYGDSLFA VLHMVELDDD DELNVGELNV FVGPNYVLSI RNHTEQDFRD 120
  121 VRKRCEREPH LLQEGSAFVF YALMDQVVDR YFPILETLGT ELEELEDRIF AKATPASSRA 180
  181 IIEDLYSLKR RLVMLYQHTA PLIEPLAKLT GGRIPQVCSG MEPYFRDVYD HLQRIVKTIE 240
  241 GRREMVVTAI QVNLGMISLA ESEVTKRLGS FAALFAIPTM IAGIYGMNFA NMPELHLKYG 300
  301 FYGCIAAMVV ADFALWWRFK RAGWL

Type	Start	End	Confidence
Cytoplasmic	1	267	0.89
Transmembrane Helix	268	289	0.90
Non-Cytoplasmic	290	298	0.71
Transmembrane Helix	299	317	0.97
Cytoplasmic	318	325	0.79