YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77968586, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGSALRGRN GRLTHVRRAF ALAAALWIAA PAAHADDGMI VIPGRGETAE TALAHANAAS  60
   61 GGNAAMAPGS VVAPDAGRAA SSTGAAAGAS GTGYAAQPAG TMVVTTVPPP AAVPAPAPAP 120
  121 APRPVYATAR MNAGTGTGYG APRAADPNAI ATVVAGTAEP ASNPARPTPQ QAMAARLAAA 180
  181 RAASAAPAPR AVPVSASPAP AANAANAAQP ATPPGQQDPE SIRRAALAFL QQQVAGLPGK 240
  241 TTATVTTAFP RGLAACTTLE PFMPTGARLW GRTTVGVRCA GERPWTVYLQ AKVTVQATYY 300
  301 VAARQIAPGE PLSAADLVAR DGDLTVLPLA VITDPAQAIG ATALARISAG LPLRQDMLKS 360
  361 AASVSAGQTV RVVAAGPGFT ISAEGSALAN AAPGQSVRVR MAAGQIVTAI VKDAGTVEIP 420
  421 L

Type	Start	End	Confidence
Signal Peptide	1	35	0.99
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	421	0.99