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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47230479
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGMVMFRRR WSVGSDDLVL PALFLFILHC IWLVVLSVVL FGLPYGSDQS CSVTLVDHGR  60
   61 GYLGILVSCL ICESAIMWLS MRGSILYTQP REAVQYVIYI RLAILLVELV YAVVGIAWLV 120
  121 QYYQPCSDVT AKNLALGIVA CNWLVILSVC ITLMCTFDPT GRTFVKLKAT RRRQRNLTTY 180
  181 TLRHRLEEGQ ASSWSRRLKF FMCCTRAQDT QSDAYSEVAS LFAEFFRDLD IVPSDIIAGL 240
  241 VLLRQTQRSK RSSILDQANN DVIAFLSGMP VTRNTRYLDL KSSAEMNMYK DVCYYMLFAL 300
  301 AAYGWPMYLM RKPVCGLCHL ASSCPCASTS GSRLSQSVTV EEDNCCGCNI LAIRRHFLDR 360
  361 DLKQVHIVYT SCHDAVYETP FFVAVDHDKK KVVISIRGTL SLKLYVVFSV LKNGGICQDA 420
  421 LTDLTGDSER LPVEEQHGTW LGHKGMVYSA EYIKKKLEQE MILSQAFGRD LNKGTMHYGL 480
  481 VIVGHSLGAG TAAILSFLLR PQYPTLHCYS YSPPGGLLSV DAMEYSKEFV TSVVLGKDLV 540
  541 PRLGLSQLEG FRRHLLEVLQ KSNKPKWRII AGGTKCIPKS ELPLEEEDPQ AQPAAPPSSR 600
  601 LWLHPSDLSI ALSASTPLYP PGRIIHVVHN HPPETCCGQE DPTYSALWGD NKAFNEVIIS 660
  661 PAMLNEHMPH MVMEGLHKVL ENYNKGKTAL LSAAKIMVSP TEVDLNPESV FMDASATSQQ 720
  721 PTPTVHHRRN SSVRSCAQSE ISLDGFSECP PPPVPVVLRG ARERLAVELR DRKAPLAIME 780
  781 SLSDAESLYS LDSRRSSAAL RGSPMLSGLP FPLDAPIPEE NPSLSSRTEL LAADCLCQAT 840
  841 PEHLGEVGPF FTPTRSTPEE PMHLSPATPH YSGHHSPPLL NQTSNGNPSQ AVLEFAQYLD 900
  901 SLFKLDGSSS PPLELSDGES ESGRGSFEQG DSLGNGQQLD DKQLLARATL EPNLVPKPPR 960
  961 TFAGSADPSS GISLSPSFPL SSSEELNDLS P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle