YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67531829, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGQAPNDRH DGPRAQRTAS AAGERRESDG DDWDAEQQDD NIVPLTRTEA ERLFGPNVSK  60
   61 PPRVTPYKVV IAQVVLSLVA TLAWWLFSKS PGAAAQSAFL GGAIGWVPSA LFVARLKAGG 120
  121 SATVMSWVMG EALKLGVTIG MFAAVAYGYA GVHWPALLVT YLVVLKTYWI ALAWR

Type	Start	End	Confidence
Cytoplasmic	1	68	0.97
Transmembrane Helix	69	87	0.96
Non-Cytoplasmic	88	93	0.83
Transmembrane Helix	94	114	0.94
Cytoplasmic	115	123	0.82
Transmembrane Helix	124	146	0.84
Non-Cytoplasmic	147	151	0.63
Transmembrane Helix	152	172	0.82
Cytoplasmic	173	175	0.76