YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134138667, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKVTKAVFP VAGLGTRFLP ATKASPKEML PVVDKPLIQY AVEEAIAAGI TEMIFVTGRS  60
   61 KRAIEDHFDK SYEVEAELEA RGKEKLLELV RSIKPSHVDC FYVRQPEALG LGHAVLCAEK 120
  121 LVADNPFAVI LADDLLDGNP PVMKQMVDVF DHYHSSVIGV EEIPPSETKS YGIVDGKEWE 180
  181 ESIVKMSAIV EKPAPEDAPS NLGVVGRYIL KPRIFQHLRA LKPGAGGELQ LTDAIQALLA 240
  241 DEQVLAYKYQ GTRYDCGSKL GYLKATVEFA LRHPEVGAEF EAYLRTRGTA QPAA

Type	Start	End	Confidence
Signal Peptide	1	24	0.78
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	294	0.99