YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47229221
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGINRIYIRI GYAAFGTLVG ISAFLAWNIA FKQPWTAAMG GLSGVLALWT LVTHIMYVQD  60
   61 YWRTWLKGLK FFIAVGAVFS ALAVAAFITF LTLAITHKQT PTDPQSLYLS CVWSVLSLKW 120
  121 SFLLALYSYR YRQEFADISI LSDF

Type	Start	End	Confidence
Cytoplasmic	1	7	0.93
Transmembrane Helix	8	30	0.89
Non-Cytoplasmic	31	36	0.78
Transmembrane Helix	37	58	0.92
Cytoplasmic	59	70	0.87
Transmembrane Helix	71	94	0.91
Non-Cytoplasmic	95	105	0.86
Transmembrane Helix	106	127	0.83
Cytoplasmic	128	144	0.86