YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47228508
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSFTRLMS GRNAAVLLAS LGAGTMATGL LLSENNLAAE AKKKLYPPSS DFPDLRKHNN  60
   61 CMASALTPAI YARLRDKVTP NNWTLDQSIQ TGVDNPGHPF IKTVGCVAGD EESYEVFADL 120
  121 FDPVIKDRHN GYDPRTMIHP TDLDASKITN GMFDERYVLS SRVRTGRSIR GLSLPPACSR 180
  181 AERREVERVA VTALSGLKGD LAGRYYSLGD MTEQEQQQLI DDHFLFDKPV SPLLTCAFMA 240
  241 RDWPDARGIW HNNEKTFLIW INEEDHTRII SMEKGGNMKR VFERFCRGLK QVEQLIQERG 300
  301 WEFMWNEHLG YILTCPSNLG TGLRAGVHVR LPKLSKDPRF SKILDNLRLQ KRGTGGVDTA 360
  361 ATGDTFDISN NDRLGKSEVE LVQLLVDGVN YLIECEKRLE RGQDIKVPAP VPQFRK

Type	Start	End	Confidence
Signal Peptide	1	29	0.96
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	416	0.99