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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|172056377, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSNTKRPA GGPPGGGPGG GNMMMMGEKP KNFKATFRRL LGYLKPRRNA LIAVFVAAIL  60
   61 STIFMIAGPK IMGTAITELF EGAYAKFQGV PGAAIDFTKI GQILLLLAGL YVVSSLFSYL 120
  121 QQYLMSGIAQ KTVYDLREDV NQKLERLPLK YYDGRPNGET LSRVTNDIDT IGSTLQQSVT 180
  181 SFITSIVTIV GILIMMLTIS PLLTLISLVS LPISIFAIRP ILKRSQKYFA DQQRTLGQLN 240
  241 GHVEEMYTGH PVVKAFGHER RAVEQFDAVN EELYEAGRKA QFISGIIMPM MMFIGNISYV 300
  301 LISVVGGILV TQRSISIGDI QAFITYTRQF TQPITQTANI ANIVQSTVAA AERVFELLDE 360
  361 EEEVKEVTTH HLTKADGAVA FEHVDFGYGE QLLIEDMNID VKPGQTVAIV GPTGAGKTTL 420
  421 INLLMRFYEL NSGVIRIDGI DTRKMSREDL RTTFGMVLQD TWLFNGTIRD NLAYGKTGAT 480
  481 EDDIVEAAKT AHADHFIRTL PDGYDTVLNE EASNISQGQK QLLTIARAVL ADPPIMILDE 540
  541 ATSSVDTRTE IFIQQAMKRL MEGRTSFVIA HRLSTIKDAD LILVMDQGRV IEQGTHEALL 600
  601 EANGFYADLY NSQFSEKEVV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle