YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLGC_EXIS2
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKNVVAML LAGGEGKRLG ALTKHTAKPA VAFGGKYRII DFPLSNCTNS GIDTVGVLTQ  60
   61 YEPLELNRYL GIGSAWDLDR RNGGLTILPP YQAQNGKNWY EGTANAIYRN MSYINQYDPD 120
  121 YVLVLSGDHI YKMDYEKMIE EHRQGGADVT ISVREVPWEE APRFGILNTD EDLRINEFEE 180
  181 KPENPKSNLA SMGIYVFNWD VLKRHLIQDA GDAESSFDFG KNIIPNMLYE NLNIRAYKFK 240
  241 GYWKDVGTIQ SLWEANMDLL EADPEFDLYE PSWKVHSVNP NQQPQYIGNN ASIETSIINE 300
  301 GCHIEGEINH SVLFYGVDVA EGSLVKDSVI FPNVKIGKDV TIHRAILADG VVVEDGATIG 360
  361 TPNGEVFVIE ANSVIPKNEV VKEAIQ

Type	Start	End	Confidence
Signal Peptide	1	16	0.81
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	386	0.99