YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47227252
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVFKTIPT HMDYKGQKLA EQIFQGIILV SAVIGFVYGL IIEQFGWTVY IVLAGFAVSC  60
   61 VLTLPPWPMY RKNPLSWQPL IPDVSGETSQ KPSEGIKKKK HK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.94
Transmembrane Helix	21	42	0.92
Non-Cytoplasmic	43	46	0.88
Transmembrane Helix	47	68	0.91
Cytoplasmic	69	102	0.94