YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68055556, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWKSKISGA LVAALALGSI SFTPVIAKTE PTKIVAGPQM VTSQSTIDAY YLPASGKTGA  60
   61 ALKASLHDII DNHTQVSYDT VWTALKETDQ DPNNANNVIE LYTGKSIAKS NNGGNVGQWN 120
  121 REHVWAKSHG DFGTSNGPGT DLHHLRAEDV VVNSARGNLD FDNGGTKYAG CDCYRDSDSW 180
  181 EPPTRVKGDI ARMIFYMAVR YEGGGEIDLE ASENVSNGAN PLHGKLSTLK AWNKLDPVDA 240
  241 TEIRRNDIIF EKWQKNRNPF IDHPEYVTSI WGN

Type	Start	End	Confidence
Signal Peptide	1	27	0.99
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	273	0.99