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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47226491
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVTLQRSP TPSAASSAST ATTTAGEVSW GGGRAERQRR RAEARTPSAG MGEMWPKERP  60
   61 AAGGYISSLT PPHASEGAHE DVGVLGLDRW GLLGAPGVAG VVRQSCEDLG SEDERRANQS 120
  121 RGGAGVRKRR EFSLGDIRVP VPRSRMHLVV EPIEEAVMKM LPVFMDKAGL TQPEINHILS 180
  181 ESFFMVKGAA LFLQQGSSHP GQKAHPNHKH AGDLPQHLQV MINILRSEDR IKLAVRLESA 240
  241 WSDRVRYMVV VYTSGRQDTE ENILLGIDFT NKDCKSCSIG MVLPLWSDTK IHLDGDGGFS 300
  301 VNTAGRTHVF KPVSVQVMWS ALQVLHKVCE LSRRYNYFPG GMALTWIGYY ESCIASDQSC 360
  361 INEWNAMKDL ETTRPDSPSM FVDKPSERER TECLIKAKLR SIMTCQDLEN VTCKQIRTEL 420
  421 EQHMNCNLKE YKEFIDNEML LILGQMDKAT LIFEHVYLGS EWNASNLEEL QETGVRYILN 480
  481 VTREIDNFFP GTFNYHNIRV YDEDATDLLS HWNDTYNFIV KAKKNDSKCL VHCKMGVSRS 540
  541 ASTVIAYAMK EYGWTLDKAY DFVKQKRSIT RPNAGFMRQL AEYEGILDAS KQRHNKLWHP 600
  601 DADCEMAEGP PELAHSGEGE EGRPPAREPS ASSCCEEGMS ERGAACPSPC RTVSLDIDPA 660
  661 YNNYYFRRLS DSALDSEPST PVRGPPLLGM EKVFIEIEDV ERDALLDDET FDGREGLPLS 720
  721 HFGPSAAGTA AQTSSRGPEP LEELRLRLEF STVEEEDEEE VQKEEAEMEV LMQPDDGGGG 780
  781 GDDAQDVDTE GNGMDLATLN ENSNNNKRLN IPQERHVEPP AVTPPADVST PAATFEQKAS 840
  841 PPLLSELRLN PSASDVPSAS LPLSRTSTLT PACGSVCDRA DTHATPTPTA PLCREKEPRD 900
  901 PPDKLQLQDS DASLEIQPIQ RRESSPAGLC ELKGVGQEKP PAACCVGHPQ EPLLQLQRSG 960
  961 LVRRRTERLE RLSGVSQERL HSPLHTCQRS KRSSSHSEGE EGPGLAGDFP KSSTPCQVRL1020
 1021 EPPMTNEALL GLMGSGFLTP NSSPHGSTLT RSSSSNSLHS VRGKPGLVRQ RAQEIETRIR1080
 1081 LAGLTVPTRL KRSNSLAKLD NLNFSSEDLC S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle