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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47226189
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLSMTKGS LLRLQRRDDV TELQQSSFFQ THKRELDCGS SQKLRDLRNT GTFTVRLATM  60
   61 DHPTRQKAED KEACSLLVKA TSALSREQRC KVQSCKGASP LSGTHPALPS SSNISLEGIP 120
  121 RVKSDFFIFP WSCLTFLKKK KKGVNKKRCQ RKGIKLCIIL ERNRATSLNP EARRATLSPE 180
  181 NRPLTEAPLR NEIQRGGVST EEGRQNLMEV WRIMEEGVAE KKGLMGSAAH GCEGRLQSVS 240
  241 SLEAGTSKLS SCKEEIKPPS RAGPQMSPSD FLDKLMGRTS GYDARIRPNF KGPPVNVTCN 300
  301 IFINSFGSVT ETTMDYRLNV FLRQKWNDPR LAYREYPDDS LDLDPSMLDS IWKPDLFFAN 360
  361 EKGANFHEVT TDNKLLRIFQ DGSVLYSIRL TLILSCPMDL KNFPMDIQTC TMQLESFGYT 420
  421 MNDLIFEWLS ENPVQVADDL TLPQFVLKEE KDLGYCTKYY NTGKFTCIEV KFHLERQMGY 480
  481 YLIQMYIPSL LIVILSWVSF WINMDAAPAR VGLGITTVLT MTTQSSGSRA SLPKVSYVKA 540
  541 IDIWMAVCLL FVFAALLEYA AVNFVSRQHK EFIRLRKKER QQRIEEELLR ESRGFYFRGY 600
  601 GLGHCLQNKD GTAAEGATVF TQPPPVAVYD KDALHKRFVD RAKRIDTISR AVFPLSFLIF 660
  661 NIFYWVTYKV LRHEDIH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle