YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47225578
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLERLPNEE KLSLCRKYYL GGFAFLPFLW LVNVVWFFRE AFIKPTYTEQ LQIKTYVKRS  60
   61 AAGLLLWVAV LTTWITIFQH YRSEWGEVGD SISFTIPLGI P

Type	Start	End	Confidence
Cytoplasmic	1	17	0.65
Transmembrane Helix	18	38	0.91
Non-Cytoplasmic	39	58	0.61
Transmembrane Helix	59	78	0.89
Cytoplasmic	79	101	0.62