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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7488184
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPHRDHIAWA SVLTALNQAN LSGKTLSVFS SVGSSSGLRP DDFVFSALVK ACANLGSIDH  60
   61 GRQVHCHFIV SEYANDEVVK SSLVDMYAKC GLLNSAKAVF DSIRVKNTIS WTAMVSGYAK 120
  121 SGRKEEALEL FRILPVKNLY SWTALISGFV QSGKGLEAFS VFTEMRRERV DILDPLVLSS 180
  181 IVGACANLAA SIAGRQVHGN ALIDMYAKCS DVIAAKDIFS RMRHRDVVSW TSLIVGMAQH 240
  241 GQAEKALALY DDMVSHGVKP NEVTFVGLIY ACSHVGFVEK GRELFQSMTK DYGIRPSLQH 300
  301 YTCLLDLLGR SGLLDEAENL IHTMPFPPDE PTWAALLSAC KRQGRGQMGI RIADHLVSSF 360
  361 KLKDPSTYIL LSNIYASASL WGKVSEARRK LGEMEVRKDP GHSSVEVRKE TEVFYAGETS 420
  421 HPLKEDIFRL LKKLEEEMRI RNGYVPDTSW ILHDMDEQEK EKLLFWHSER SAVAYGLLKA 480
  481 VPGTPIRIVK NLRVCGDCHV VLKHISEITE REIIVRDATR YHHFKGGKCS CNDFCNYGHA 540
  541 KSIFILNKET IKWRRVASLI PHTQREMATE TVLATAVSNG KSKGCCKSGP GYATPLAAMA 600
  601 GPREKLIYVT ALYSGTGRDK PDYLATVDVD PSSPTFSSVI HRLKMPYIGD ELHHTGWNSC 660
  661 SSCHGDASAD RRYLVLPGLI SGRIYAIDTK TDPKAPSLYK VVEPKEIAEK TGLAFPHTSH 720
  721 CLASGDMLVS CLGDKEGNAK GNGFLLLDSD FNVKSRWDKP GHGPLFGYDF WYQPRFKTMI 780
  781 STSWGAPKAF SKGFNLQHVA DGLYGSHLHI YQWPEGEMKQ IIDLGNTGLL PLEIRFLHDP 840
  841 SKDTGYVGSA LSSNMIRFFK NSDDTWSHEA SEVVISVKPL KVENWILPEM PGLITDFLIS 900
  901 LDDRFFYFVN WLHGDIRQYN IEDPKNPVLT GQIWVGGLLQ KGSPYKAVGE DGNTYQFDVP 960
  961 QIKVCNQNII FWSVLTKGKS LRAGPQMIQL SLDGKRLYAT NSLFSAWDRQ FYPEIMEKGS1020
 1021 HIIQIDVDTD KGGLTLNPDF FVDFGDEPDG PALAHEMRYP GGDCTSDIWI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle