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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13958023
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQPVVRIGD WLVTPSVNQI SRRGRQITLE PRLIDLLMYF AHHPDEVLSR DNIIDHVWMR  60
   61 TIVTNHVVAK AISELRKSLR RSADSNAEYI VTVPKRGYKL TAPVIWCEEN GDEIDNSSTS 120
  121 PPPPIAANKC KPTEGVTAAT PVPPASLQTP TKKAKKPRIA AFWTWVMSLL SLATLVVFIV 180
  181 ISVVNHNAAV TKTRLLLNPQ NINFRFEGGN PCNNWVSQDS YAIGLGGLIT DLLNTYSTFM 240
  241 VHDKTNYRVN DPSSSGKTLT IQFVNQRHYR AQQCFMSVVL IDNADGSTML DKRYFVTNTN 300
  301 QLSIQDDLCN SLSFVLTQPW PNRMREQLAL FRTPQNTALM RFYRGAQLIL SGDAQALGKA 360
  361 TDILNGIIKE TPDFNYAYEY KVLVNVLRQS QQPFDKEQVA ALNEKFKKID QIPGVEKTSV 420
  421 YYKIKTVHLL GKGDIHAAYE EINKSIQLEM SWVNTPVGER LRNEVRSSAA DAYLTAFNLR 480
  481 PGQNTLYWIE NGVFQTSVQK IVPYLNSFLA ED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle