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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CRK6_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLISFNFL FLFSFLTSSF TASAQDPFYL NHYCPNTTTY SSNSTYSTNL RTLLSSLSSR  60
   61 NASYSTGFQN ATAGKAPDRV TGLFLCRGDV SPEVCRNCVA FSVNQTLNLC PKVREAVFYY 120
  121 EQCILRYSHK NILSTAITNE GEFILSNTNT ISPNQKQIDG FTSFVSSTMS EAAGKAANSS 180
  181 RKLYTVNTEL TAYQNLYGLL QCTPDLTRAD CLSCLQSSIN GMALSRIGAR LYWPSCTARY 240
  241 ELYPFYNESA IETPPLPPPP PPPPPRESLV STPPISSSSL PGKSGNSTVL VVAVVVLAVL 300
  301 LFIALVGYCF LAKKKKKTFD TASASEVGDD MATADSLQLD YRTIQTATND FAESNKIGRG 360
  361 GFGEVYKGTF SNGKEVAVKR LSKNSRQGEA EFKTEVVVVA KLQHRNLVRL LGFSLQGEER 420
  421 ILVYEYMPNK SLDCLLFDPT KQIQLDWMQR YNIIGGIARG ILYLHQDSRL TIIHRDLKAS 480
  481 NILLDADINP KIADFGMARI FGLDQTQDNT SRIVGTYGYM APEYAMHGQF SMKSDVYSFG 540
  541 VLVLEIISGR KNSSFGESDG AQDLLTHAWR LWTNKKALDL VDPLIAENCQ NSEVVRCIHI 600
  601 GLLCVQEDPA KRPAISTVFM MLTSNTVTLP VPRQPGFFIQ CRAVKDPLDS DQSTTTKSFP 660
  661 ASIDDESITD LYPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle