YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47223764
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPVLRVST PRWERIARVL VCLLGILLSL YAFHVERENA RDPSYKALCD VSSSISCSKV  60
   61 FSSRWGRGFG LLGSIFGNES ALNQPNSVYG IVFYAFQLLL GMTVSAMAAL ILMTTSIMSV 120
  121 VGSLYLGYIL YFVLKDLCVI CVTTYALNFI LFVLNYKRLV YLNEAWKQQL QAKQD

Type	Start	End	Confidence
Cytoplasmic	1	15	0.87
Transmembrane Helix	16	35	0.92
Non-Cytoplasmic	36	92	0.77
Transmembrane Helix	93	126	0.71
Cytoplasmic	127	127	0.35
Transmembrane Helix	128	154	0.73
Non-Cytoplasmic	155	175	0.54