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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47223267
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLEERLADVV TPLWRLSYEE QLELKQKQQE RILCQLCGYL SDDFQPQAPS HLRNKLTFPL  60
   61 LPIRPSPVRD GYRNKSTFSV NRGMDGNPKT VGFYIGTGKK ANIVCVNGDH LLNMPEKHKL 120
  121 VARCYQDFIR LSPLEPCLLF HSGGHWREIT VRTNREGHTM AIVYFHPQTL SPQEIAVHKA 180
  181 DLVDYFTLGP GSVCQLDSLF FQESTMTRTT HEDSPYQLLH GQPHIYEEVL SFRFRISADA 240
  241 FFQVNQAAAE VLYSTARDLC VPHPSVQGDR TRVGTLLDVC CGTGAFGITT SPRVDRVVGV 300
  301 ELMEQAVEDA HHNASLNRVL NCEFIPGRAE VVLPGLVSQI GCRGSVAAVV NPARAGLHHK 360
  361 VVRALRNQPD IRRLVYVSCK PDGEAMRNFR ELCCAPDPQK KLTGEAFSPS LALPVDMFPH 420
  421 TAHCELVILF ESSGDICTLA QATMTATENR HLRAAGHQNG GAMAEASTVE DVFDDTYREK 480
  481 DGPKPAMRLV WRNIILMSLL HVGALYGLLL LPSASASTLA WTAACYLFSA LGVTAGAHRL 540
  541 WSHRSYKASF PLRVFLAVAN SMSFQNDIFE WARDHRVHHK FSETDADPHN AKRGFFFAHI 600
  601 GWLLVRKHPD VIEKGGKLDL SDLKADEVVM FQRRHYKLSV VTLCFLVPTL VPWYFWGESL 660
  661 VVGYFVPGLL SAAHMWGNRP YDATINPREN PVVAFSAVGE GFHNYHHTFP FDYATSEFGC 720
  721 RLNLTTAFID LMCFLGLAGD RKRVSKDTIL ARAQRTGDGS HKSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle