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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ERL2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRIETMKGL FFCLGMVVFM LLGSVSPMNN EGKALMAIKA SFSNVANMLL DWDDVHNHDF  60
   61 CSWRGVFCDN VSLNVVSLNL SNLNLGGEIS SALGDLMNLQ SIDLQGNKLG GQIPDEIGNC 120
  121 VSLAYVDFST NLLFGDIPFS ISKLKQLEFL NLKNNQLTGP IPATLTQIPN LKTLDLARNQ 180
  181 LTGEIPRLLY WNEVLQYLGL RGNMLTGTLS PDMCQLTGLW YFDVRGNNLT GTIPESIGNC 240
  241 TSFEILDVSY NQITGVIPYN IGFLQVATLS LQGNKLTGRI PEVIGLMQAL AVLDLSDNEL 300
  301 TGPIPPILGN LSFTGKLYLH GNKLTGQIPP ELGNMSRLSY LQLNDNELVG KIPPELGKLE 360
  361 QLFELNLANN NLVGLIPSNI SSCAALNQFN VHGNFLSGAV PLEFRNLGSL TYLNLSSNSF 420
  421 KGKIPAELGH IINLDTLDLS GNNFSGSIPL TLGDLEHLLI LNLSRNHLNG TLPAEFGNLR 480
  481 SIQIIDVSFN FLAGVIPTEL GQLQNINSLI LNNNKIHGKI PDQLTNCFSL ANLNISFNNL 540
  541 SGIIPPMKNF TRFSPASFFG NPFLCGNWVG SICGPSLPKS QVFTRVAVIC MVLGFITLIC 600
  601 MIFIAVYKSK QQKPVLKGSS KQPEGSTKLV ILHMDMAIHT FDDIMRVTEN LDEKYIIGYG 660
  661 ASSTVYKCTS KTSRPIAIKR IYNQYPSNFR EFETELETIG SIRHRNIVSL HGYALSPFGN 720
  721 LLFYDYMENG SLWDLLHGPG KKVKLDWETR LKIAVGAAQG LAYLHHDCTP RIIHRDIKSS 780
  781 NILLDGNFEA RLSDFGIAKS IPATKTYAST YVLGTIGYID PEYARTSRLN EKSDIYSFGI 840
  841 VLLELLTGKK AVDNEANLHQ MILSKADDNT VMEAVDAEVS VTCMDSGHIK KTFQLALLCT 900
  901 KRNPLERPTM QEVSRVLLSL VPSPPPKKLP SPAKVQEGEE RRESHSSDTT TPQWFVQFRE 960
  961 DISKSSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle