YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47222412
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGDVSAPPP SLLEVVSFIG KTVGAGAALT AAVYLLRKVC LIMAWKSGGT SHAELVNNLR  60
   61 KNGIIKSDKV YEVMLATDRA HFSRCNPYMD SPQSIGFQAT ISAPHMHAYA LELLHDQLYE 120
  121 GAKALDVGSG SGILSVCFAR MVGPKGRVIG IDHIKELVDD SVSNVKKDDP SLIASGRVKL 180
  181 LVGDGRLGYS EEAPYDAIHV GAAAPTVPQA LLDQLKPGGR LILPVGPAGG NQMLEQHDKL 240
  241 EDGSTRMKPL MGVIYVPLTD REKQWSRDEL

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.87
Transmembrane Helix	18	36	0.63
Cytoplasmic	37	270	0.60