YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47222304
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFQTDDGFQ ESWVELHFGG TASQSTSHHG SQEQIPTTAQ EGDVEKLLLE AQRESGRTSS  60
   61 RGSSQSNSPL RARTPLLLWR GSDGNSSQSD EDFQERRCEV ENLIKKNADW IWDWSSRPEN 120
  121 NPPKEFLLKY PKRSTPLSIR NTSVMKKGGV LSADFLKLFL PSLILSHILA VGLGICIGRR 180
  181 WIPHNTY

Type	Start	End	Confidence
Cytoplasmic	1	154	0.68
Transmembrane Helix	155	178	0.77
Non-Cytoplasmic	179	187	0.60