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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47222254
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QASLSIWGWG GLGVVLFLVT FGPFAIFYLA FYIFCFVGGG FAVTLLYGKI NSEKQLEQCE  60
   61 QSYLPPTQVG ILKTLDEMKL EMKPIKIDRR LTGSSFIDEP LQQVIQFALR DYIQYWYYTL 120
  121 SEDESFLLEI RQTLQNALVQ FCTRSKEVDW QPYFTTRLVD DFATHLRVFR KAQDRLADRE 180
  181 DKQRDVTEEL VDSFFEAEVE MERKVCRDMV CTSRKDEEGR LASDGLLARQ REAPDTKVLP 240
  241 FPAERCVCRV FSGFLRDLCE LLLYLLLPPG DFHNKNMRYF LREVLACGVL LPLINQLSDP 300
  301 DYINQFVIWM IRDSSCNYEA FMNILKLTDK PTELEAVKDK VAEELQYLRS LDTAGDDINV 360
  361 IKNQINSLLF VKKVCETRIQ RLQSGKEVDA LKLAANFGKL CVIPLDHILV HNIALQFFMD 420
  421 FMQSAGAQAE LFFWLTVEGY RVTAQQQLEA MQGWQKDGKK QPSATKALLK SAALGVYEQY 480
  481 LSDKVGAFHH HTGSLELSFL MAVQQICLVM QQASPRVQVD QESVVNLGEK LQKDDPTPEI 540
  541 FDEIQRNRGD SLNANRPTKR RFSLNDLPTL PPYLHVVLQV YDLMLHDERY YPSFKQSPLY 600
  601 VRMLAELDML KEPSYRGSDD GEGESFNGSP TGSISLSLDD LSNSCHDESM HIHACISDTV 660
  661 ADACFPGFWA AAGVCNDHGK TYALYTITVH RRTQDGSEEC WKTYRRYSDF HDFHMRITEQ 720
  721 SRSSNLWLHP TFQFENLASI LKLPGKKTFN NMDRDFLEKR KKDLNAYLQL LLNPEMVKAC 780
  781 PTLVPYVYDF LENKAYSKGK GEFARKVAGE FVCFLSNIDT FVNPLRSSMR NMSNAVKALP 840
  841 DSLAEGMNKV SDNMGRMSER LGQDIKQSIL KVPPSHTGRA AGFQASPTPP LVSNPPQVPP 900
  901 LLPKSDIDPE HCRVSAQLDD NVDDNIPLRV MLLLMDEVFD LKEKNQWLRR NIKNLLQQLI 960
  961 RATYGDTINR KIVDHVDFLT SPEQVAEYVK KFRDSYWPNG ILAETPPRRD KNIRMRTRVA1020
 1021 AKTSLLGIMP DELKHIIGAD TTRKGILRVF DMFQHQPMNR RLVYVFLEGF LETMFPQFKF1080
 1081 PELFVKLHSR SPRILRYSQR IK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle