YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47221554
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESEQLLSLS GSALAQAVSS LLETPGLYVF SDILELPNVK ELENGPHAPV YQLLNLFAYG  60
   61 TYCDYKERAA SLPELTPAQR NKLRHLSIIS LASNLKCLPY SLLLQQLELK NVRELEDLLI 120
  121 EAVYCDIIQG KLDQRNQQVE VDCSVGRDLG PNELPNIINT LQEWCTGCEA VLCGIEEQVS 180
  181 RANQYRESQL KVKIQVETEV SNLQKTLKAS AASPSSGPAP AGAASNQDAD QPAEPRDPAS 240
  241 SQEPRQPGKK SSKVKGLRGS GKIWSKSN

Type	Start	End	Confidence
Signal Peptide	1	20	0.91
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	268	0.99