YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47221526
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPELVLALC LSAALSAPSL DPQLDQHWEL WKGWHSKQYH EKEEGWRRMV WEKNLKKIEL  60
   61 HNLEHSMGQH SYRLGMNHFG DMTHEEFRQI MNGYKHKPQR KFRGSLFMEP NFLEAPRAVD 120
  121 WRDKGYVTPV KDQLKPVRPA EKGLPLYGVN TAVPELLLSG FASARPGSVW LLLGLQHHRG 180
  181 PGGQHFRQTG KLVSLSEQNL VDCSRPEGNE GCNGGLMDQA FQYIKDNGGL DSEASYPYLA 240
  241 TDDQPCHYDP SNNSANETGF VDVPSGSERA LMKAVASVGP VSVAIDAGHE SFQFYQSGIY 300
  301 YEKECSSEEL DHGVLVVGYG FQGEDVDGKK FWIVKNSWSE NWGNKGYIYM AKDRKNHCGI 360
  361 AR

Type	Start	End	Confidence
Signal Peptide	1	22	0.88
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	362	0.99