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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47220416
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEGDSVGES IHGKPSVVSA FFTRIGQIYQ SWLDKSTPFY AVRWAATLLL TAVYMIRVYL  60
   61 LQGWYIVTYA LGIYHLNLFI AFLSPKVDPS LLDEDEGPAL PTKQNEEFRP FIRRLPEFKF 120
  121 WHSATKGIVI AMVCTFFEVF NVPVFWPILV MYFIMLFCIT MKRQIKHMIK YRYLPFTHGK 180
  181 RTYKGKDETG KPLHLNEFFI RMLKSKLSTL NPSSQSFLLP NYRRFQLMRF SMEEINNSSD 240
  241 LLPGVSLGYE IFDICSDLQS FPGVLKQISV NGSVSYGASS SVFSSNENFP SFLRTVHPNK 300
  301 EVINVIIRIL QHFNWRWAAF LNSDNDFGID GRNLFIQGIK DTDICLAYTE NLNMLTDFTQ 360
  361 TFQQINLQKI NVIIVFAPKM FVEALINSAI KLNISDKVWI ADDGWSLNKN LPKKEGIRRI 420
  421 GTVIGVSQPV VTIPAFDDFI FSSKSQKQCE EREEQPFCNQ ACKCGYLSAE EITSADPTFS 480
  481 FPVYSAVYAI AHALHKVLQC GAGSCNRSVT VHPHMVLAEL KKSNFTLLNT TIRFNEYGDP 540
  541 KFGSYSIVFW NDKGFPEEVG FFHYFPATKF YINGTKIQWF QNGEVPTSLC STECLEGYIK 600
  601 KLNGIHKCCF TCEVCPMGTF VNSTADPYSC LPCEKHQWST AGSTSCLPRT VEWVPFTDPA 660
  661 AVVILAGACL LVALTAAMCV LFAVNYNTPV VRSAGGPMCF LILGCLSLCS ISVFFYFERP 720
  721 TEAFCILRFM PFLLFYAVCL ACFAVRSFQI VIIFKIAAKF PRVHSWWMKY HGQWLVISMT 780
  781 FVLQAVVIVI GFSSDPPLPY SNFLSYPDKI ILGCDVNLNM ASTSFFLLLL LCILCFTFSY 840
  841 MGKDLPKNYN EAKAITFCLL LLILTWIIFA TAFMLYHGKY IHTLNALAVL SSAYCFLLWY 900
  901 FLPKCYIIIF QPHKNTQKYF QGLIQDYTKT ISQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle