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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47220103
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CLQGPFVQSN MDKVVISLLL LGTAVTMVHA CPKYCVCQNL SESLGTLCPS KGLLFVPPDI  60
   61 DRRTVELRLG GNFILKITTQ DFANMTSLVD LTLSRNTIST IQPFSFIDLE TLRSLHLDSN 120
  121 RLTELGSDDL RGLVNLQHLI LNNNQLNRIS KSTFDDLMLT LEDLDLSYNN LRSVPWEAIR 180
  181 KMVNLHQMSL DHNLISFIPE GTFTDLEKLA RLDLTSNRLQ KLPPDPIFAR SQSSTMMSTP 240
  241 YAPLLSLSFG GNPLHCNCEV LWLRRLDRED DMETCASPAS LKGRYFWSVR EEEFVCEPPL 300
  301 ITQHTHKLLV LEGQTASLRC KAVGDPMPTV HWVAPDDRLI SNSSRATVYE NGTLDITITT 360
  361 SKDYGIFTCI AANAAGESTA SIELSIIQLP HLSNNTNRTT QSKSGLSDIT SSTKISKGES 420
  421 KPVPEKIVSV SEITAVSALV KWTASKSAPK VKMYQLQYNC SEDEVLIYRM IPMTNRAFVV 480
  481 TNLVPGMQYD LCVLAIWEDT ATTLTATNIV GCTQFVTSED YPQCQSLHSG FLGGTMILVI 540
  541 GGIIVAILLV FIIILMVRYK VTNGIQINKM PNVSNTYSQT NGGLNRFNGA PPQVKSTVVV 600
  601 MREEMVEFKC GSLQSSLSSS SSSSNSLDSR TGRGPSDCYS MQSSKCNTLP SSKFRRHGAK 660
  661 TNLDHLLGAF TSLEMRAVAK DHHGSSVPST TSNTMMTVAM VPPSDKEPLL GRAESTTMLG 720
  721 RLLGLPQEGK PKRSHSFDMG HVGATQCRSN YPRRISNIWT KRSLSVNGML LQYDESEDEK 780
  781 PTCETSEWVM ESTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle